Package index

Graph Construction

Create undirected graphs from various representations.

nug_from_edge_list()

Create an undirected graph from an edge list

nug_from_adj_list()

Create an undirected graph from an adjacency list

nug_from_adj_mat()

Create an undirected graph from an adjacency matrix

nug_from_grid()

Create a regular 2D grid graph

Model & Inference

Specify spatial random field models and run MCMC.

srf_model()

Create a spatial random field model

mdgm()

mdgm: Mixture of Directed Graphical Models

mrf()

MRF spatial configuration

mcmc()

Run MCMC inference for a spatial random field model

SrfModel MdgmModel

Spatial Random Field Model

SrfResult

MCMC Result

sample_mrf()

Sample from a Markov Random Field

Superseded

Functions that have been replaced by newer alternatives.

mdgm_model() superseded

Create an MDGM model (legacy interface)